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找到 143 个相关结果 / 数据库与 SQL

研究学习 / 检索整理

metabolomics-workbench-database

metabolomics-workbench-database

262

Access NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR data, m/z searches, study metadata, for…

Stars 27,326
apidatabasemetabolomicsworkbench

研究学习 / 检索整理

biopython

biopython

256

Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access…

Stars 22,676
uidatabaseagentbiopython

研究学习 / 检索整理

gget

gget

253

Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST searches, AlphaFold structures, enrichment analysis. Best for…

Stars 22,780
uidatabaseagentgget

研究学习 / 检索整理

bioservices

bioservices

251

Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with…

Stars 22,676
reactuidatabaseagent

研究学习 / 检索整理

storing-and-querying-vectors

storing-and-querying-vectors

250

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Stars 0
uiragagentstoring

研究学习 / 检索整理

imaging-data-commons

imaging-data-commons

248

Query and download public cancer imaging data from NCI Imaging Data Commons using idc-index. Use for accessing large-scale radiology (CT, MR, PET) and…

Stars 22,804
uiauthagentgithub

研究学习 / 检索整理

chembl-database

chembl-database

246

Query ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors,…

Stars 27,314
databasechemblquerybioactive

研究学习 / 检索整理

depmap

depmap

246

Query the Cancer Dependency Map (DepMap) for cancer cell line gene dependency scores (CRISPR Chronos), drug sensitivity data, and gene effect profiles. Use for…

Stars 22,730
apiagentdepmapquery

研究学习 / 检索整理

primekg

primekg

246

Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological data including genes, drugs, diseases, phenotypes, and more.

Stars 22,911
databaseagentprimekgquery

研究学习 / 检索整理

benchling-integration

benchling-integration

245

Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for…

Stars 22,675
uiapiagentworkflow

研究学习 / 检索整理

lamindb

lamindb

244

This skill should be used when working with LaminDB, an open-source data framework for biology that makes data queryable, traceable, reproducible, and FAIR.…

Stars 22,817
designapiagentlamindb

研究学习 / 检索整理

pymatgen

pymatgen

244

Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for…

Stars 22,919
databaseagentworkflowpymatgen

研究学习 / 检索整理

cellxgene-census

cellxgene-census

244

Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated…

Stars 22,689
agentcellxgenecensusquery

研究学习 / 检索整理

etetoolkit

etetoolkit

243

Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for…

Stars 22,750
databaseagentetetoolkitphylogenetic

研究学习 / 检索整理

polars-bio

polars-bio

243

High-performance genomic interval operations and bioinformatics file I/O on Polars DataFrames. Overlap, nearest, merge, coverage, complement, subtract for…

Stars 22,903
uiperformanceapisql

研究学习 / 检索整理

literature-review

literature-review

242

Use when "literature review", "research synthesis", "systematic review", "academic search", or asking about "find papers", "cite sources", "research gaps",…

Stars 5
uidatabaseworkflowliterature

研究学习 / 检索整理

hmdb-database

hmdb-database

223

Access Human Metabolome Database (220K+ metabolites). Search by name/ID/structure, retrieve chemical properties, biomarker data, NMR/MS spectra, pathways, for…

Stars 27,322
databasehmdbaccesshuman

研究学习 / 检索整理

cosmic-database

cosmic-database

219

Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision…

Stars 27,317
uidatabasecosmicaccess

研究学习 / 检索整理

chroma

chroma

204

Open-source embedding database for AI applications. Store embeddings and metadata, perform vector and full-text search, filter by metadata. Simple 4-function…

Stars 8,472
uidatabaseragllm

研究学习 / 检索整理

design-postgres-tables

design-postgres-tables

204

Use this skill for general PostgreSQL table design. **Trigger when user asks to:** - Design PostgreSQL tables, schemas, or data models when creating new tables and when modifying existing ones. - Choose data types, constraints, or indexes for PostgreSQL - Create user tables, order tables, reference tables, or JSONB schemas - Understand PostgreSQL best practices for normalization, constraints, or indexing - Design update-heavy, upsert-heavy, or OLTP-style tables **Keywords:** PostgreSQL schema, table design, data types, PRIMARY KEY, FOREIGN KEY, indexes, B-tree, GIN, JSONB, constraints, normalization, identity columns, partitioning, row-level security Comprehensive reference covering data types, indexing strategies, constraints, JSONB patterns, partitioning, and PostgreSQL-specific best practices.

Stars 1,729
designuiperformancesecurity

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