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研究学习 / 检索整理
geniml
geniml
This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec,…
研究学习 / 检索整理
depmap
depmap
Query the Cancer Dependency Map (DepMap) for cancer cell line gene dependency scores (CRISPR Chronos), drug sensitivity data, and gene effect profiles. Use for…
研究学习 / 检索整理
primekg
primekg
Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological data including genes, drugs, diseases, phenotypes, and more.
研究学习 / 检索整理
deeptools
deeptools
NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq…
研究学习 / 检索整理
hugging-face-paper-publisher
hugging-face-paper-publisher
Publish and manage research papers on Hugging Face Hub. Supports creating paper pages, linking papers to models/datasets, claiming authorship, and generating…
研究学习 / 检索整理
benchling-integration
benchling-integration
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for…
研究学习 / 检索整理
molfeat
molfeat
Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular…
研究学习 / 检索整理
esm
esm
Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C…
研究学习 / 检索整理
startup-analysis
startup-analysis
Analyze a startup from three perspectives: VC investor, job applicant, and CEO/founder. Use this skill whenever the user wants to evaluate a startup, assess whether to invest in or join a startup, do due diligence, evaluate a job offer from a startup, understand a startup's competitive position, or assess company health and trajectory. Triggers: "analyze this startup", "should I join [company]", "is [company] a good investment", "evaluate [company]", "due diligence on [company]", "what do you think of [startup]", "should I take this startup job offer", "how healthy is [company]", "startup assessment", "company analysis", "is [company] worth joining", "what's the outlook for [company]", "research [company] for me", any mention of evaluating or assessing a startup or tech company from investment, career, or strategic perspectives — provide all three perspectives by default.
研究学习 / 检索整理
分析研究论文
analyzing-research-papers
分析和总结研究论文的专业方法论,提取核心贡献、方法细节并置于相关背景中解读。适用于…
研究学习 / 检索整理
groove-work-compound
groove-work-compound
Document lessons, update rules/templates/docs. Use to capture learnings after review.
研究学习 / 检索整理
cellxgene-census
cellxgene-census
Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated…
研究学习 / 检索整理
qutip
qutip
Quantum physics simulation library for open quantum systems. Use when studying master equations, Lindblad dynamics, decoherence, quantum optics, or cavity QED.…
研究学习 / 检索整理
phylogenetics
phylogenetics
Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or…
研究学习 / 检索整理
firecrawl-research
firecrawl-research
This skill should be used when the user requests to research topics using FireCrawl, enrich notes with web sources, search and scrape information, or write…
研究学习 / 检索整理
dhdna-profiler
dhdna-profiler
Extract cognitive patterns and thinking fingerprints from any text. Use this skill when the user wants to analyze how someone thinks, understand cognitive…
研究学习 / 检索整理
matchms
matchms
Spectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and…
研究学习 / 检索整理
lamindb
lamindb
This skill should be used when working with LaminDB, an open-source data framework for biology that makes data queryable, traceable, reproducible, and FAIR.…
研究学习 / 检索整理
iso-13485-certification
iso-13485-certification
Comprehensive toolkit for preparing ISO 13485 certification documentation for medical device Quality Management Systems. Use when users need help with ISO…
研究学习 / 检索整理
pymatgen
pymatgen
Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for…