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Internal guidance for composing Codex and GPT-5.4 prompts for coding, review, diagnosis, and research tasks inside the Codex Claude Code plugin

Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data…

Analyzes single pattern implementation, calculates compliance/completeness/quality scores, identifies gaps. Use when auditing a specific pattern.

Statistical models library for Python. Use when you need specific model classes (OLS, GLM, mixed models, ARIMA) with detailed diagnostics, residuals, and…

Convert an ML research paper into a complete, runnable code repository. 3-stage pipeline from Paper2Code — Planning (UML + dependency graph) → Analysis…

Guides self-review of YOUR OWN academic paper before submission with adversarial stress-testing. Core method: 5-aspect checklist (contribution sufficiency,…

Query any public GitHub repo's documentation via DeepWiki. Use when needing to understand a library, framework, or dependency. Triggers on "look up docs", "how does X work", "deepwiki", "deepwiki".

Orchestrate the full paper pipeline end-to-end. Manage state propagation between phases (literature → plan → code → experiments → figures → tables → writing →…

Checks layer boundary violations, transaction boundaries, session ownership, cross-layer consistency. Use when auditing architecture layers.

Create educational videos using Remotion with Kurzgesagt/回形针 style. Use when users want to: (1) create teaching or educational videos, (2) design video…

Discover scientific equations from data using LLM-guided evolutionary search (LLM-SR). Multi-island algorithm with softmax-based cluster sampling, island…

Write ML experiment code with iterative improvement. Generate training/evaluation pipelines, debug errors, and optimize results through code reflection. Use…

Searching internet for technical documentation using llms.txt standard, GitHub repositories via Repomix, and parallel exploration. Use when user needs: (1)…

Use when the user asks about GitNexus itself — available tools, how to query the knowledge graph, MCP resources, graph schema, or workflow reference. Examples:…

Multi-source deep research agent. Searches the web, synthesizes findings, and delivers cited reports. No API keys required.

Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and…

Structured metadata search for Basic Memory: query notes by custom frontmatter fields using equality, range, array, and nested filters. Use when finding notes…

Search, scrape, and interact with the web via the Firecrawl CLI. Use this skill whenever the user wants to search the web, find articles, research a topic, look something up online, scrape a webpage, grab content from a URL, get data from a website, crawl documentation, download a site, or interact with pages that need clicks or logins. Also use when they say "fetch this page", "pull the content from", "get the page at https://", or reference external websites. This provides real-time web search with full page content and interact capabilities — beyond what Claude can do natively with built-in tools. Do NOT trigger for local file operations, git commands, deployments, or code editing tasks.

Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly requests PowerPoint/PPTX poster…

Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC. Agency-specific formatting, review criteria, budget preparation, broader…