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研究学习 / 检索整理

esm

esm

245

Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C…

Stars 22,749
designagentesmcomprehensive

研究学习 / 检索整理

hugging-face-paper-publisher

hugging-face-paper-publisher

245

Publish and manage research papers on Hugging Face Hub. Supports creating paper pages, linking papers to models/datasets, claiming authorship, and generating…

Stars 10,502
authworkflowhuggingface

研究学习 / 检索整理

startup-analysis

startup-analysis

245

Analyze a startup from three perspectives: VC investor, job applicant, and CEO/founder. Use this skill whenever the user wants to evaluate a startup, assess whether to invest in or join a startup, do due diligence, evaluate a job offer from a startup, understand a startup's competitive position, or assess company health and trajectory. Triggers: "analyze this startup", "should I join [company]", "is [company] a good investment", "evaluate [company]", "due diligence on [company]", "what do you think of [startup]", "should I take this startup job offer", "how healthy is [company]", "startup assessment", "company analysis", "is [company] worth joining", "what's the outlook for [company]", "research [company] for me", any mention of evaluating or assessing a startup or tech company from investment, career, or strategic perspectives — provide all three perspectives by default.

Stars 0
tailwinduiragstartup

研究学习 / 检索整理

molfeat

molfeat

245

Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular…

Stars 22,861
uiagentmolfeatmolecular

研究学习 / 检索整理

qiskit

qiskit

244

IBM quantum computing framework. Use when targeting IBM Quantum hardware, working with Qiskit Runtime for production workloads, or needing IBM optimization…

Stars 22,920
backenduiagentqiskit

研究学习 / 检索整理

histolab

histolab

244

Lightweight WSI tile extraction and preprocessing. Use for basic slide processing tissue detection, tile extraction, stain normalization for H&E images. Best…

Stars 22,795
uiapiagentworkflow

研究学习 / 检索整理

phylogenetics

phylogenetics

244

Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or…

Stars 22,896
uiagentphylogeneticsand

研究学习 / 检索整理

pymatgen

pymatgen

244

Materials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for…

Stars 22,919
databaseagentworkflowpymatgen

研究学习 / 检索整理

matchms

matchms

244

Spectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and…

Stars 22,843
uiagentworkflowmatchms

研究学习 / 检索整理

lamindb

lamindb

244

This skill should be used when working with LaminDB, an open-source data framework for biology that makes data queryable, traceable, reproducible, and FAIR.…

Stars 22,817
designapiagentlamindb

研究学习 / 检索整理

iso-13485-certification

iso-13485-certification

244

Comprehensive toolkit for preparing ISO 13485 certification documentation for medical device Quality Management Systems. Use when users need help with ISO…

Stars 22,809
uiagentiso13485

研究学习 / 检索整理

pennylane

pennylane

244

Hardware-agnostic quantum ML framework with automatic differentiation. Use when training quantum circuits via gradients, building hybrid quantum-classical…

Stars 22,892
uiagentpennylanehardware

研究学习 / 检索整理

dhdna-profiler

dhdna-profiler

244

Extract cognitive patterns and thinking fingerprints from any text. Use this skill when the user wants to analyze how someone thinks, understand cognitive…

Stars 22,732
authagentdhdnaprofiler

研究学习 / 检索整理

pathml

pathml

244

Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation,…

Stars 22,890
designuiragagent

研究学习 / 检索整理

qutip

qutip

244

Quantum physics simulation library for open quantum systems. Use when studying master equations, Lindblad dynamics, decoherence, quantum optics, or cavity QED.…

Stars 22,923
uiagentqutipquantum

研究学习 / 检索整理

cellxgene-census

cellxgene-census

244

Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated…

Stars 22,689
agentcellxgenecensusquery

研究学习 / 检索整理

glycoengineering

glycoengineering

243

Analyze and engineer protein glycosylation. Scan sequences for N-glycosylation sequons (N-X-S/T), predict O-glycosylation hotspots, and access curated…

Stars 22,781
ragagentglycoengineeringanalyze

研究学习 / 检索整理

gtars

gtars

243

High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap…

Stars 22,791
performanceragagentgtars

研究学习 / 检索整理

etetoolkit

etetoolkit

243

Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for…

Stars 22,750
databaseagentetetoolkitphylogenetic

研究学习 / 检索整理

polars-bio

polars-bio

243

High-performance genomic interval operations and bioinformatics file I/O on Polars DataFrames. Overlap, nearest, merge, coverage, complement, subtract for…

Stars 22,903
uiperformanceapisql

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