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研究学习 / 检索整理

paperzilla

paperzilla

265

Chat with your agent about projects, recommendations, and canonical papers in Paperzilla. Use when users ask for recent project recommendations, canonical…

Stars 22,886
agentworkflowpaperzillachat

研究学习 / 检索整理

competitor-intel

competitor-intel

263

Analyzes competitors using web research to provide verified business metrics, actionable leverage strategies, and predicted next moves. Use when user needs…

Stars 165
uiragcompetitorintel

研究学习 / 检索整理

stable-baselines3

stable-baselines3

263

Production-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick…

Stars 22,987
uiapiagentagents

研究学习 / 检索整理

dask

dask

262

Distributed computing for larger-than-RAM pandas/NumPy workflows. Use when you need to scale existing pandas/NumPy code beyond memory or across clusters. Best…

Stars 22,721
apiagentworkflowdask

研究学习 / 检索整理

metabolomics-workbench-database

metabolomics-workbench-database

262

Access NIH Metabolomics Workbench via REST API (4,200+ studies). Query metabolites, RefMet nomenclature, MS/NMR data, m/z searches, study metadata, for…

Stars 27,326
apidatabasemetabolomicsworkbench

研究学习 / 检索整理

pymc

pymc

262

Bayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison, posterior checks, for probabilistic…

Stars 22,919
uiapiagentworkflow

研究学习 / 检索整理

simpy

simpy

261

Process-based discrete-event simulation framework in Python. Use this skill when building simulations of systems with processes, queues, resources, and…

Stars 22,963
uiagentmonitoringsimpy

研究学习 / 检索整理

consciousness-council

consciousness-council

258

Run a multi-perspective Mind Council deliberation on any question, decision, or creative challenge. Use this skill whenever the user wants diverse viewpoints,…

Stars 22,708
uiagentconsciousnesscouncil

研究学习 / 检索整理

pymoo

pymoo

257

Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and…

Stars 22,919
designagentpymoomulti

研究学习 / 检索整理

biopython

biopython

256

Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access…

Stars 22,676
uidatabaseagentbiopython

研究学习 / 检索整理

geopandas

geopandas

256

Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial…

Stars 22,779
agentgeopandaspythonlibrary

研究学习 / 检索整理

modal

modal

256

Cloud computing platform for running Python on GPUs and serverless infrastructure. Use when deploying AI/ML models, running GPU-accelerated workloads, serving…

Stars 22,860
uidockerapirag

研究学习 / 检索整理

scanpy

scanpy

253

Standard single-cell RNA-seq analysis pipeline. Use for QC, normalization, dimensionality reduction (PCA/UMAP/t-SNE), clustering, differential expression, and…

Stars 22,944
uiagentworkflowscanpy

研究学习 / 检索整理

gget

gget

253

Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST searches, AlphaFold structures, enrichment analysis. Best for…

Stars 22,780
uidatabaseagentgget

研究学习 / 检索整理

pyhealth

pyhealth

252

Build clinical/healthcare deep-learning pipelines with PyHealth — loading EHR/signal/imaging datasets (MIMIC-III/IV, eICU, OMOP, SleepEDF, ChestXray14,…

Stars 22,919
uiagentworkflowpyhealth

研究学习 / 检索整理

pydicom

pydicom

252

Python library for working with DICOM (Digital Imaging and Communications in Medicine) files. Use this skill when reading, writing, or modifying medical…

Stars 22,919
uiagentpydicompython

研究学习 / 检索整理

scvi-tools

scvi-tools

251

Deep generative models for single-cell omics. Use when you need probabilistic batch correction (scVI), transfer learning, differential expression with…

Stars 22,947
uiagentscvitools

研究学习 / 检索整理

bioservices

bioservices

251

Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with…

Stars 22,676
reactuidatabaseagent

研究学习 / 检索整理

pydeseq2

pydeseq2

250

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq…

Stars 22,919
designuitestingagent

研究学习 / 检索整理

molecular-dynamics

molecular-dynamics

249

Run and analyze molecular dynamics simulations with OpenMM and MDAnalysis. Set up protein/small molecule systems, define force fields, run energy minimization…

Stars 22,861
performanceapiagentmolecular

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